Apple Cinnamon Crumb Muffins: The Ultimate Fall Breakfast Treat

There’s something magical about the aroma of apples and cinnamon wafting through your kitchen on a crisp morning. These Apple Cinnamon Crumb Muffins capture that exact feeling in a portable, handheld treat. They’re not just ordinary muffins—they’re the perfect balance of tender, spiced cake studded with juicy apple chunks and topped with an irresistibly buttery crumb topping that creates that bakery-style experience right at home.

Whether you’re rushing out the door or savoring a slow weekend breakfast, these muffins deliver that warm, comforting flavor that makes you feel like you’re wrapped in a cozy sweater, even if you’re just at your desk.

Why This Recipe Is Awesome

Bakery-Style Apple Crumb Muffins with Cinnamon Streusel
Bakery-Style Apple Crumb Muffins with Cinnamon Streusel

These Apple Cinnamon Crumb Muffins stand out from ordinary muffin recipes for several compelling reasons. First, they achieve that elusive bakery-style dome and texture without requiring professional equipment or techniques. The crumb topping creates a delightful textural contrast—crunchy on top, tender inside—that makes each bite interesting.

What really makes these special is how they strike the perfect balance between wholesome and indulgent. The fresh apples provide natural moisture and sweetness, reducing the need for excess sugar, while the warm spices create depth without overwhelming the palate. Unlike many coffee shop muffins that can be cloyingly sweet, these let the natural flavor of the apples shine through.

They’re also incredibly versatile—perfect for breakfast, brunch, snacks, or even dessert when slightly warmed with a scoop of vanilla ice cream. I’ve refined this recipe through countless iterations to ensure it’s approachable for beginners while still impressing seasoned bakers.

Equipment needed: 12-cup muffin tin, paper liners, mixing bowls, whisk, wooden spoon, measuring cups, measuring spoons

Apple Cinnamon Crumb Muffins Recipe

Apple Cinnamon Crumb Muffins

These bakery-worthy Apple Cinnamon Crumb Muffins feature tender, spiced batter studded with fresh apple chunks and crowned with a buttery cinnamon streusel topping. Perfect for cozy mornings, they balance wholesome fruit with just-right sweetness.
Prep Time 15 minutes
Bake time 30 minutes
Total Time 45 minutes
Course Breakfast
Cuisine American
Servings 12 muffins

Ingredients
  

For the Crumb Topping

  • ½ cup all-purpose flour
  • cup packed brown sugar
  • ¼ cup unsalted butter cold and cubed
  • 1 teaspoon ground cinnamon
  • Pinch of salt

For the Muffins

  • 2 cups all-purpose flour
  • 1 tablespoon baking powder
  • 2 teaspoons ground cinnamon
  • ½ teaspoon ground nutmeg
  • ½ teaspoon salt
  • ½ cup unsalted butter melted and slightly cooled
  • cup granulated sugar
  • cup packed brown sugar
  • 2 large eggs at room temperature
  • ½ cup milk at room temperature
  • 1 tablespoon vanilla extract
  • 2 cups diced apples about 2 medium apples, preferably Honeycrisp, Granny Smith, or Braeburn

Instructions
 

  • Preheat your oven to 375°F (190°C) and line a 12-cup muffin tin with paper liners or spray with non-stick cooking spray.
  • Prepare the crumb topping by combining flour, brown sugar, cinnamon, and salt in a medium bowl. Add the cold cubed butter and use your fingers or a pastry cutter to work the mixture until it resembles coarse crumbs. Place in the refrigerator while you prepare the muffin batter.
  • In a large bowl, whisk together the flour, baking powder, cinnamon, nutmeg, and salt until well combined.
  • In a separate bowl, mix the melted butter with both sugars until smooth. Add the eggs one at a time, beating well after each addition. Stir in the milk and vanilla extract.
  • Pour the wet ingredients into the dry ingredients and gently fold together using a rubber spatula or wooden spoon just until combined. The batter will be thick – don’t overmix or your muffins will be tough!
  • Fold in the diced apples until evenly distributed throughout the batter.
  • Divide the batter evenly among the prepared muffin cups, filling each about ¾ full.
  • Remove the crumb topping from the refrigerator and sprinkle generously over each muffin, gently pressing it into the batter slightly.
  • Bake for 18-22 minutes or until a toothpick inserted in the center comes out clean or with just a few moist crumbs. The tops should be golden brown and slightly domed.
  • Allow the muffins to cool in the pan for 5 minutes before transferring to a wire rack to cool completely.

Notes

  • For the best texture, don’t overmix the batter once you combine wet and dry ingredients – a few small lumps are perfectly fine.
  • Room temperature eggs and milk blend more easily with other ingredients, creating a more uniform batter.
  • The type of apple matters – firm, tart-sweet varieties like Honeycrisp or Granny Smith hold their shape during baking and provide the best flavor contrast.
  • Dice the apples into small, uniform pieces (about ¼-inch) for even distribution and proper baking.
  • These muffins freeze beautifully for up to 3 months – just thaw overnight in the refrigerator and warm slightly before serving.

Calories & Nutritional Info

  • Calories: Approximately 285 calories per muffin
  • Carbohydrates: 40g
  • Protein: 4g
  • Fat: 12g
  • Sugar: 22g
  • Contains: Gluten, dairy, eggs
  • Not suitable for: Vegan, gluten-free, or dairy-free diets without modifications

Common Mistakes to Avoid

  • Overmixing the batter – This develops too much gluten, resulting in tough, dense muffins instead of tender ones. Mix just until ingredients are incorporated.
  • Using cold ingredients – Cold eggs and milk don’t incorporate properly, creating an uneven batter. Let them come to room temperature first.
  • Cutting apples too large – Pieces that are too big will remain crunchy and may cause the muffins to fall apart. Aim for small, uniform dice.
  • Opening the oven door too early – This causes temperature fluctuations that can lead to collapsed muffins. Wait until at least 15 minutes into baking before checking.
  • Underbaking – Muffins that are removed too early will be gummy in the middle. Make sure a toothpick inserted in the center comes out clean.

Alternatives & Substitutions

  • Gluten-free option: Substitute a 1:1 gluten-free flour blend for the all-purpose flour. Add ¼ teaspoon xanthan gum if your blend doesn’t include it.
  • Dairy-free version: Replace butter with coconut oil or a plant-based butter alternative, and use almond, oat, or soy milk instead of dairy milk.
  • Fruit variations: Substitute pears, peaches, or mixed berries for the apples (reducing the amount to 1½ cups for berries due to their moisture content).
  • Whole wheat option: Replace up to half the all-purpose flour with whole wheat flour for added fiber and nutty flavor.
  • Add-ins: Mix in ½ cup chopped walnuts, pecans, or ¼ cup of rolled oats to the crumb topping for extra texture.

FAQs

Why did my muffins sink in the middle?

This typically happens when there’s too much leavening, causing the muffins to rise too quickly and then collapse. Make sure you’re measuring the baking powder correctly. Another common cause is opening the oven door too early during baking, which creates a sudden temperature change.

Can I make these muffins ahead of time?

Absolutely! You can prepare the batter the night before and refrigerate it in a covered bowl. The next morning, give it a gentle stir, scoop into muffin cups, add the crumb topping, and bake. Add 2-3 minutes to the baking time since the batter will be cold.

How do I store these muffins to keep them fresh?

Store completely cooled muffins in an airtight container at room temperature for up to 2 days. For longer storage, refrigerate for up to 1 week or freeze for up to 3 months. The crumb topping may soften slightly when stored, but a quick 10-second warm-up in the microwave will refresh them.

Can I reduce the sugar in this recipe?

Yes, you can reduce the granulated sugar in the muffin batter by up to ¼ cup without significantly affecting the texture, especially if your apples are naturally sweet. However, I don’t recommend reducing the brown sugar in the crumb topping as it’s essential for the proper consistency.

Why are my apples sinking to the bottom of the muffins?

This happens when apple pieces are too heavy for the batter. Try cutting them into smaller pieces, or toss the diced apples in 1 tablespoon of flour before folding them into the batter. Also, make sure your batter isn’t too thin – it should be thick enough to hold the fruit in suspension.

Final Thoughts

These Apple Cinnamon Crumb Muffins are more than just a recipe—they’re a little moment of joy in your day. Whether you’re a seasoned baker or just starting out, there’s something deeply satisfying about pulling a tray of these fragrant, golden-topped treats from the oven. Don’t be surprised if they become your new signature bake that friends and family request by name. Happy baking!

Photo of author
WRITTEN BY
Quincy McCune is our recipe development specialist who transforms traditional classics into innovative culinary experiences. With formal training in both French and Asian cooking techniques, Quincy has a unique ability to blend different culinary traditions into harmonious, approachable recipes. His methodical testing process ensures that every recipe we publish is foolproof, while his creative spirit keeps our content fresh and exciting for home cooks at every skill level.

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